Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954932.1_cds_XP_016493625.1_83724
CDS Infomation

[gene=LOC107812951] [db_xref=GeneID:107812951] [protein=endoglucanase 12-like] [protein_id=XP_016493625.1] [location=join(160524..160721,161776..162189,164317..164403,164486..164641,164751..165035,165788..166108)] [gbkey=CDS]
Sequence

ATGTCTTCAACAAGTCATTTTGTGACTGGATTTTACCTTGTGATTTTATTAGGAAATGCA
GTTGCTTCAATAGACTATGGAATAGCCCTTACAAAATCTTTACTGTATTTTGAAGCTCAA
AGATCAGGAAAATTGCCCCCTAACCAGCTTGTTCAATGGCGTGGAGATTCAGCACTTCAA
GATGGCAAAGACGCAGGGATTGACTTAACAGGAGGATATTATGATGCTGGAGACAATGTC
AAATTTGGATTTCCAATGGCATTTACAGTGACAATGCTAGCATGGAGCGTAGTCGAATTT
GGCGAAGAATTAGAAGCCAAGAAAGAATTAACAAATACTCTAAATGCAATCAAATGGGGA
ACTGATTATTTCATTAAAGCACATACACAACCTCATGTTTTATATGGTGAAGTTGGAGAT
GGGAATTCTGATCACCAATGTTGGGAAAGACCAGAAGATATGACAACGCCGAGGAATTCT
TACAAAGTTGATGAACAACATCCTGGTTCTGATCTTGTTGGAGAAACTGCTGCTGCTTTT
GCTGCTGCTGCCATTGCTTTTAACAAGTCGGATTCGAATTATTCTTCTCAACTTCTCATC
CATGCAAAAGAGTTATTTGATTTTGCTAAAAAGTTCCAAGGCCAGTACCAAACTAGCATT
TCAGTGGCAGGTCAATTCTACAGTAGCACCGGCTATGAGGATGAACTCTTGTGGGCTGCT
ACTTGGTTGCTAAAAGCCACACAAGACAAAACATACCTAGACTACATCAATGATCAAGCC
ACTAGTTCAGGTGGCACTAGATCCATGTTTTCTTGGGACGACAAGTATGTCGGCGCACAA
GTCCTGATCGCCAAGAATCTGTTAGAGAAGAAATTTCCATGGAACGAAAGTTCATTGAGT
CAATACAAGAAAAATGCTGAGGAATTCATATGCAACTGCATACAAAAAGGGAACAACAAC
ATAAAGAAGACTAATGGAGGACTTCTATGGTGGCAACCTTGGAATAATCTTCAATATGTT
ACAGCTGCAACATTTGTTATAACCAGTTATGCAGATACACTGTTTGCTACTAAAAATTCT
CTCCAATGCGCTACTGGAACAGTGGAATCTTCGAACCTAATCACGTTCGTCAAATCTCAG
GTGGATTATATACTTGGCGAAAACCCGAAAAAAATGAGTTACATGGTAGGGTTTGGGACA
AATTACCCGCAAAAGATTCATCACAGAGGAGCATCAATTGTGTCAATTAAGAAAGACAGG
ACTACAGTGAGTTGCAGTGAAGGTTTCAGTTTATGGTTTTATAAAAATGCACCAAATCCA
AATATTTTAGATGGGGCAATAGTTGGAGGACCTGATATTAGTGATAACTATAATGATTCC
AGAAGTAATTTTCAGCAAGCTGAAGCAGCTACAGCTAATACAGCACCATTAGTTGGAGTT
TTAGCCCGACTAACTGAATAA

Peptide Sequence

PEP ID

XP_016493625.1
PEP Infomation

PREDICTED: endoglucanase 12-like [Nicotiana tabacum]
Sequence

MSSTSHFVTGFYLVILLGNAVASIDYGIALTKSLLYFEAQRSGKLPPNQLVQWRGDSALQ
DGKDAGIDLTGGYYDAGDNVKFGFPMAFTVTMLAWSVVEFGEELEAKKELTNTLNAIKWG
TDYFIKAHTQPHVLYGEVGDGNSDHQCWERPEDMTTPRNSYKVDEQHPGSDLVGETAAAF
AAAAIAFNKSDSNYSSQLLIHAKELFDFAKKFQGQYQTSISVAGQFYSSTGYEDELLWAA
TWLLKATQDKTYLDYINDQATSSGGTRSMFSWDDKYVGAQVLIAKNLLEKKFPWNESSLS
QYKKNAEEFICNCIQKGNNNIKKTNGGLLWWQPWNNLQYVTAATFVITSYADTLFATKNS
LQCATGTVESSNLITFVKSQVDYILGENPKKMSYMVGFGTNYPQKIHHRGASIVSIKKDR
TTVSCSEGFSLWFYKNAPNPNILDGAIVGGPDISDNYNDSRSNFQQAEAATANTAPLVGV
LARLTE

Transcript Sequence

Gene sequence data has not been registered.